The Chilean scallop Argopecten purpuratus (Lamarck, ) is a ‘bay scallop’ found in shallow bays from Paita, Peru (5°S, 81°W) to Valparaiso. PDF | Daily striae on the shell of the scallop, Argopecten purpuratus, were used to investigate its growth in a protected population within La. Gigascience. Apr 1;7(4). doi: /gigascience/giy Draft genome of the Peruvian scallop Argopecten purpuratus. Li C(1), Liu X(2), Liu B(1), Ma B(3).

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By using this site, you agree to the Terms of Use and Privacy Policy. It furthers the University’s objective of excellence in research, scholarship, and education by publishing worldwide. Finally, among these annotated genes, Related articles in Web of Science Google Scholar.

Argopecten purpuratus

Resolving the evolutionary relationships of molluscs with phylogenomic tools. Inter-specific hybridization between Argopecten purpuratus and Argopecten irradians irradians. The mollusca and branchiopoda. Unlike other Argopecten scallops, the Peruvian scallop normally has a long life span of up to purpudatus to 10 years.

Draft genome of the Peruvian scallop Argopecten purpuratus.

Views Read Edit View history. Related topics Oyster farming Land snail farming Gastropod anatomy Bivalve anatomy. Peru scallops are farmed using ropes suspended to the seafloor. The annotation strategy for protein-coding genes integrated de novo prediction with homology and transcriptome data-based evidence.

They grow on the ropes and feed on particles in the water.


Draft genome of the Peruvian scallop Argopecten purpuratus | GigaScience | Oxford Academic

About SASSI Started inSASSI was established to drive change in the local seafood industry by working with suppliers and sellers of seafood, as well as informing and inspiring consumers to make sustainable seafood choices. The mer frequency distribution analysis [ 8 ] was performed on the remaining clean reads to estimate the genome size of the Peruvian scallop using the following formula: Citing articles via Web of Science 3.

How was it caught or farmed? Receive exclusive offers and updates from Oxford Academic. Here, we performed whole genome sequencing, assembly, and gene annotation of the Peruvian scallop, with an important aim to develop genomic resources for genetic breeding in scallops.

GigaScienceVolume 7, Issue 4, 1 Aprilgiy, https: Based on the phylogenetic tree Fig. The de novo prediction of genes was carried out with four programs: Draft genome of the Peruvian scallop Argopecten purpuratus Chao Li.

Availability of supporting data. Therefore, researchers have been using it to develop hybrid vigor. It is arglpecten great economic importance in the local aquaculture sector and exported to international markets. This Pectinidae -related article is a stub.

Progress in mass culture of Chlamys Argopecten purpurata Lamarck with notes on its natural history. National Center for Biotechnology Information.

From Wikipedia, the free encyclopedia.

WoRMS – World Register of Marine Species – Argopecten purpuratus (Lamarck, )

The possible role of telomeres in the short life span of the bay scallop, Argopecten irradians irradians Lamarck Bootstrap support of phylogenetic tree. Finally, we determined that the total repeat sequences are , bp, accounting for The current genome data will also facilitate genetic analyses purpiratus the evolutionary history of the abundant scallops in the world.


Finally, a draft genome of Articles with ‘species’ microformats All stub articles. A maximum likelihood tree was constructed using RAxML based on single-copy protein-coding genes of the related arogpecten. This genome assembly will provide solid support for in-depth biological studies.

First, in order to solve the issue of heterozygosity, in our assembly process we chose kmer to draw k-mer distribution histogram and arglpecten all the kmers into homozygous kmer and heterozygous kmer according to the coverage depth. Where is it from?

Aquaculture ropesImported – FAO Oyster Mussel Pearl oyster Pinctada maxima. Close mobile search navigation Article navigation. Through mapping to the core eukaryotic genes, genes Argopecten purpuratus Scientific classification Kingdom: TEclass—a tool for automated classification of unknown eukaryotic transposable elements. The mate-pair libraries 2 kb, 5 kb, 10 kb, and 20 kb and purpuratux libraries bp, bp were all sequenced on the Illumina HiSeq platform with paired-end bp.

Finally, the heterozygous contigs and homozygous contigs were distinguished based on contig coverage depth.